STRINGSTRING
SIT44986.1 SIT44986.1 eprH eprH bsaO bsaO prgI prgI invA invA SIT44989.1 SIT44989.1 spaL spaL SIT44963.1 SIT44963.1 spaP spaP SIT44982.1 SIT44982.1 SIT45000.1 SIT45000.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT44986.1Type III secretion system protein BsaP. (371 aa)    
Predicted Functional Partners:
eprH
Type III secretion apparatus protein PrgH/EprH.
  
  
 0.919
bsaO
Type III secretion system protein.
  
  
 0.874
prgI
Protein PrgI.
  
    0.874
invA
Invasion protein InvA.
  
  
 0.819
SIT44989.1
Type III secretion system transcriptional regulator BsaN.
  
    0.781
spaL
Putative ATP synthase SpaL; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.661
SIT44963.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
 0.587
spaP
Surface presentation of antigens protein SpaP.
  
  
 0.576
SIT44982.1
Hypothetical protein; No homology to any previously reported sequences.
       0.535
SIT45000.1
Type III secretion system BasJ.
  
  
 0.531
Your Current Organism:
Paraburkholderia ribeironis
NCBI taxonomy Id: 1247936
Other names: Burkholderia sp. STM 7168, Burkholderia sp. STM 7217, Burkholderia sp. STM 7296, DSM 101188, LMG 29351, LMG:29351, P. ribeironis, Paraburkholderia ribeironis Bournaud et al. 2017, STM 7296, STM:7296
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